Package: pheble 0.1.0

pheble: Classifying High-Dimensional Phenotypes with Ensemble Learning

A system for binary and multi-class classification of high-dimensional phenotypic data using ensemble learning. By combining predictions from different classification models, this package attempts to improve performance over individual learners. The pre-processing, training, validation, and testing are performed end-to-end to minimize user input and simplify the process of classification.

Authors:Jay Devine [aut, cre, cph], Benedikt Hallgrimsson [aut]

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pheble.pdf |pheble.html✨
pheble/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/jaydevine/pheble/issues

On CRAN:

10 exports 0.63 score 181 dependencies 255 downloads

Last updated 1 years agofrom:174e2a2ee6. Checks:OK: 1 NOTE: 6. Indexed: yes.

Exports:%>%ph_anomalyph_ctrlph_ensembleph_equateph_evalph_iqrph_outsph_prepph_train

Dependencies:adabagbase64encbitbit64bitopsbslibC50cachemcaretcaToolsclassclassIntclicliprclockcodetoolscoincolorspacecombinatcommonmarkConsRankcpp11crayonCubistdata.tablediagramdigestdoParalleldplyre1071earthelasticnetevaluateevtreefansifarverfastmapfontawesomeforcatsforeachFormulafrbsfsfuturefuture.applygdatagenericsggplot2glmnetglobalsgluegmodelsgowergplotsgtablegtoolshardhathavenhdaHDclassifhighrhmshtmltoolshtmlwidgetshttpuvigraphinumipredisobanditeratorsjquerylibjsonlitekernlabKernSmoothkknnklaRknitrlabelinglabelledlarslaterlatticelavalibcoinlifecyclelistenvlubridatemagrittrMASSMatrixmatrixStatsmdamemoisemgcvmimeminiUIMLmetricsModelMetricsmodeltoolsmultcompmunsellmvtnormnlmennetnumDerivparallellypartypartykitpillarpkgconfigplotmoplotrixplsplyrprettyunitspROCprodlimprogressprogressrpromisesproxypurrrquestionrR.cacheR.methodsS3R.ooR.utilsR6randomForestRANNrappdirsrARPACKRColorBrewerRcppRcppEigenreadrrecipesreshape2rglrlangrlistrmarkdownROCRROSErpartrpartScorerprojrootRSpectrarstudioapisandwichsassscalesshapeshinysourcetoolssparseLDASQUAREMstringistringrstrucchangestylersurvivalTH.datathemistibbletidyrtidyselecttimechangetimeDatetinytextzdbutf8vctrsviridisLitevroomwithrxfunXMLxtableyamlzoo