Package: pheble 0.1.0
pheble: Classifying High-Dimensional Phenotypes with Ensemble Learning
A system for binary and multi-class classification of high-dimensional phenotypic data using ensemble learning. By combining predictions from different classification models, this package attempts to improve performance over individual learners. The pre-processing, training, validation, and testing are performed end-to-end to minimize user input and simplify the process of classification.
Authors:
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pheble.pdf |pheble.html✨
pheble/json (API)
NEWS
# Install 'pheble' in R: |
install.packages('pheble', repos = c('https://jaydevine.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jaydevine/pheble/issues
- ph_crocs - Data from: The utility of cranial ontogeny for phylogenetic inference: a case study in crocodylians using geometric morphometrics
- ph_stickleback - Data from: Sexually mediated phenotypic variation within and between sexes as a continuum structured by ecology: The mosaic nature of skeletal variation across body regions in Threespine stickleback
Last updated 1 years agofrom:174e2a2ee6. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 17 2024 |
R-4.5-win | NOTE | Nov 17 2024 |
R-4.5-linux | NOTE | Nov 17 2024 |
R-4.4-win | NOTE | Nov 17 2024 |
R-4.4-mac | NOTE | Nov 17 2024 |
R-4.3-win | NOTE | Nov 17 2024 |
R-4.3-mac | NOTE | Nov 17 2024 |
Exports:%>%ph_anomalyph_ctrlph_ensembleph_equateph_evalph_iqrph_outsph_prepph_train
Dependencies:adabagbase64encbitbit64bitopsbslibC50cachemcaretcaToolsclassclassIntclicliprclockcodetoolscoincolorspacecombinatcommonmarkConsRankcpp11crayonCubistdata.tablediagramdigestdoParalleldplyre1071earthelasticnetevaluateevtreefansifarverfastmapfontawesomeforcatsforeachFormulafrbsfsfuturefuture.applygdatagenericsggplot2glmnetglobalsgluegmodelsgowergplotsgtablegtoolshardhathavenhdaHDclassifhighrhmshtmltoolshtmlwidgetshttpuvigraphinumipredisobanditeratorsjquerylibjsonlitekernlabKernSmoothkknnklaRknitrlabelinglabelledlarslaterlatticelavalibcoinlifecyclelistenvlubridatemagrittrMASSMatrixmatrixStatsmdamemoisemgcvmimeminiUIMLmetricsModelMetricsmodeltoolsmultcompmunsellmvtnormnlmennetnumDerivparallellypartypartykitpillarpkgconfigplotmoplotrixplsplyrprettyunitspROCprodlimprogressprogressrpromisesproxypurrrquestionrR.cacheR.methodsS3R.ooR.utilsR6randomForestRANNrappdirsrARPACKRColorBrewerRcppRcppEigenreadrrecipesreshape2rglrlangrlistrmarkdownROCRROSErpartrpartScorerprojrootRSpectrarstudioapisandwichsassscalesshapeshinysourcetoolssparseLDASQUAREMstringistringrstrucchangestylersurvivalTH.datathemistibbletidyrtidyselecttimechangetimeDatetinytextzdbutf8vctrsviridisLitevroomwithrxfunXMLxtableyamlzoo